dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001615_34|CGC1
Gene ID: MGYG000001615_03924
Location and strand information: 47077 - 47451 (+)
Family: 1.E.14.1.17
Protein type: TC
Protein description: Antiholin-like protein LrgA

Gene clsuter ID: MGYG000001615_34|CGC1
Gene ID: MGYG000001615_03925
Location and strand information: 47444 - 48124 (+)
Family: 2.A.122.1.6
Protein type: TC
Protein description: Inner membrane protein YohK

Gene clsuter ID: MGYG000001615_34|CGC1
Gene ID: MGYG000001615_03926
Location and strand information: 48127 - 50619 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase BoGH2A
Protein isoelectric point: 4.9588
Protein molecular weight: 91594.02
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001615_34|CGC1
Gene ID: MGYG000001615_03927
Location and strand information: 50900 - 51823 (+)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000001615_34|CGC1
Gene ID: MGYG000001615_03928
Location and strand information: 51836 - 53905 (+)
Family: GH3
Protein type: CAZyme
Protein description: Thermostable beta-glucosidase B
Protein isoelectric point: 4.8066
Protein molecular weight: 76346.37
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001615_34|CGC1
Gene ID: MGYG000001615_03929
Location and strand information: 53944 - 55302 (+)
Family: 2.A.2.3.3
Protein type: TC
Protein description: Isoprimeverose transporter

Gene clsuter ID: MGYG000001615_34|CGC1
Gene ID: MGYG000001615_03930
Location and strand information: 55662 - 56540 (+)
Family: 3.A.1.1.29
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000001615_34|CGC1
Gene ID: MGYG000001615_03931
Location and strand information: 56551 - 57477 (+)
Family: 3.A.1.1.29
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001615_34|CGC1
Gene ID: MGYG000001615_03932
Location and strand information: 57520 - 59295 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001615_34|CGC1
Gene ID: MGYG000001615_03933
Location and strand information: 59309 - 60070 (+)
Family: null
Protein type: null
Protein description: putative phosphatase YcdX

Gene clsuter ID: MGYG000001615_34|CGC1
Gene ID: MGYG000001615_03934
Location and strand information: 60190 - 62013 (-)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is human milk oligosaccharide download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001615_03924	Antiholin-like protein LrgA	TC	47077	47451	+	1.E.14.1.17
MGYG000001615_03925	Inner membrane protein YohK	TC	47444	48124	+	2.A.122.1.6
MGYG000001615_03926	Beta-galactosidase BoGH2A	CAZyme	48127	50619	-	GH2
MGYG000001615_03927	HTH-type transcriptional activator RhaS	TF	50900	51823	+	HTH_AraC
MGYG000001615_03928	Thermostable beta-glucosidase B	CAZyme	51836	53905	+	GH3
MGYG000001615_03929	Isoprimeverose transporter	TC	53944	55302	+	2.A.2.3.3
MGYG000001615_03930	putative multiple-sugar transport system permease YteP	TC	55662	56540	+	3.A.1.1.29
MGYG000001615_03931	L-arabinose transport system permease protein AraQ	TC	56551	57477	+	3.A.1.1.29
MGYG000001615_03932	hypothetical protein	null	57520	59295	+	No domain
MGYG000001615_03933	putative phosphatase YcdX	null	59309	60070	+	PHP
MGYG000001615_03934	hypothetical protein	TC	60190	62013	-	8.A.59.2.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature